HL_9Y49_024

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

ACGUGCAAAU

Length

10 nucleotides

Bulged bases

9Y49|1|A5|U|1596, 9Y49|1|A5|A|1600, 9Y49|1|A5|A|1601

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|A5|A|1593
9Y49|1|A5|C|1594
9Y49|1|A5|G|1595
9Y49|1|A5|U|1596
9Y49|1|A5|G|1597
9Y49|1|A5|C|1598
9Y49|1|A5|A|1599
9Y49|1|A5|A|1600
9Y49|1|A5|A|1601
9Y49|1|A5|U|1602

Current chains

Chain A5

LSU-alpha rRNA (1722-MER)

Nearby chains

Chain A6

Large subunit ribosomal RNA; LSU rRNA

Chain CB

60S ribosomal protein L3

Chain CP

60S ribosomal protein L17

Chain Cj

60S ribosomal protein L37