HL_9Y49_065

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UUUGGGUUUUA

Length

11 nucleotides

Bulged bases

9Y49|1|A6|U|4354

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|A6|U|4352
9Y49|1|A6|U|4353
9Y49|1|A6|U|4354
9Y49|1|A6|G|4355
9Y49|1|A6|G|4356
9Y49|1|A6|G|4357
9Y49|1|A6|U|4358
9Y49|1|A6|U|4359
9Y49|1|A6|U|4360
9Y49|1|A6|U|4361
9Y49|1|A6|A|4362

Current chains

Chain A6

LSU-beta rRNA (2069-MER)

Nearby chains

Chain A5

Large subunit ribosomal RNA; LSU rRNA

Chain CL

60S ribosomal protein L13

Chain Ca

60S ribosomal protein L27a

Chain Ci

60S ribosomal protein L36

Chain Co

60S ribosomal protein L36a