HL_9Y49_072

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUGAACGCCUCUAAG

Length

15 nucleotides

Bulged bases

9Y49|1|A6|G|4694, 9Y49|1|A6|C|4698

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|A6|C|4688
9Y49|1|A6|U|4689
9Y49|1|A6|G|4690
9Y49|1|A6|A|4691
9Y49|1|A6|A|4692
9Y49|1|A6|C|4693
9Y49|1|A6|G|4694
9Y49|1|A6|C|4695
9Y49|1|A6|C|4696
9Y49|1|A6|U|4697
9Y49|1|A6|C|4698
9Y49|1|A6|U|4699
9Y49|1|A6|A|4700
9Y49|1|A6|A|4701
9Y49|1|A6|G|4702

Current chains

Chain A6

LSU-beta rRNA (2069-MER)

Nearby chains

Chain A5

Large subunit ribosomal RNA; LSU rRNA

Chain CH

60S ribosomal protein L9

Chain CO

60S ribosomal protein L13a

Chain Cm

60S ribosomal protein L40