HL_9Y49_090

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUCGCCGUGCC

Length

11 nucleotides

Bulged bases

9Y49|1|B2|C|381, 9Y49|1|B2|C|382, 9Y49|1|B2|G|385

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|B2|G|377
9Y49|1|B2|U|378
9Y49|1|B2|C|379
9Y49|1|B2|G|380
9Y49|1|B2|C|381
9Y49|1|B2|C|382
9Y49|1|B2|G|383
9Y49|1|B2|U|384
9Y49|1|B2|G|385
9Y49|1|B2|C|386
9Y49|1|B2|C|387

Current chains

Chain B2

18S rRNA (1786-MER)

Nearby chains

Chain AI

40S ribosomal protein S8

Chain AL

40S ribosomal protein S11