HL_9Y49_100

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UGUUCAAAG

Length

9 nucleotides

Bulged bases

9Y49|1|B2|G|821, 9Y49|1|B2|U|823

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|B2|U|820
9Y49|1|B2|G|821
9Y49|1|B2|U|822
9Y49|1|B2|U|823
9Y49|1|B2|C|824
9Y49|1|B2|A|825
9Y49|1|B2|A|826
9Y49|1|B2|A|827
9Y49|1|B2|G|828

Current chains

Chain B2

18S rRNA (1786-MER)

Nearby chains

Chain AE

40S ribosomal protein S4, X isoform

Chain AJ

40S ribosomal protein S9

Chain AY

40S ribosomal protein S24