HL_9Y4G_010
3D structure
- PDB id
- 9Y4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CGUAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9Y4G_010 not in the Motif Atlas
- Homologous match to HL_8GLP_010
- Geometric discrepancy: 0.1358
- The information below is about HL_8GLP_010
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.6
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 434
Unit IDs
9Y4G|1|A5|C|368
9Y4G|1|A5|G|369
9Y4G|1|A5|U|370
9Y4G|1|A5|A|371
9Y4G|1|A5|A|372
9Y4G|1|A5|G|373
Current chains
- Chain A5
- LSU-alpha rRNA
Nearby chains
- Chain A6
- Large subunit ribosomal RNA; LSU rRNA
- Chain CC
- 60S ribosomal protein L4
- Chain Cj
- 60S ribosomal protein L37
- Chain Cl
- 60S ribosomal protein L39
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