HL_9Y4G_013

3D structure

PDB id

9Y4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GCGCC

Length

5 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9Y4G_013 not in the Motif Atlas

Geometric match to HL_4LX6_002

Geometric discrepancy: 0.2974

The information below is about HL_4LX6_002

Detailed Annotation

Purine riboswitch

Broad Annotation

Purine riboswitch

Motif group

HL_56046.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

17

Unit IDs

9Y4G|1|A5|G|993
9Y4G|1|A5|C|1047
9Y4G|1|A5|G|1048
9Y4G|1|A5|C|1049
9Y4G|1|A5|C|1050

Current chains

Chain A5

LSU-alpha rRNA

Nearby chains