HL_9Y4G_029

3D structure

PDB id

9Y4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CAUGGAAGUCG

Length

11 nucleotides

Bulged bases

9Y4G|1|A5|U|1980, 9Y4G|1|A5|A|1983, 9Y4G|1|A5|A|1984

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y4G|1|A5|C|1978
9Y4G|1|A5|A|1979
9Y4G|1|A5|U|1980
9Y4G|1|A5|G|1981
9Y4G|1|A5|G|1982
9Y4G|1|A5|A|1983
9Y4G|1|A5|A|1984
9Y4G|1|A5|G|1985
9Y4G|1|A5|U|1986
9Y4G|1|A5|C|1987
9Y4G|1|A5|G|1988

Current chains

Chain A5

LSU-alpha rRNA

Nearby chains

Chain A6

Large subunit ribosomal RNA; LSU rRNA