HL_9Y4G_051

3D structure

PDB id

9Y4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUAACUAUGAC

Length

11 nucleotides

Bulged bases

9Y4G|1|A6|A|3760

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y4G|1|A6|G|3757
9Y4G|1|A6|U|3758
9Y4G|1|A6|A|3759
9Y4G|1|A6|A|3760
9Y4G|1|A6|C|3761
9Y4G|1|A6|U|3762
9Y4G|1|A6|A|3763
9Y4G|1|A6|U|3764
9Y4G|1|A6|G|3765
9Y4G|1|A6|A|3766
9Y4G|1|A6|C|3767

Current chains

Chain A6

LSU-beta rRNA (2108-MER)

Nearby chains

Chain B2

Small subunit ribosomal RNA; SSU rRNA

Chain Bb

Transfer RNA; tRNA

Chain Dd

RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U*(MG))-3')