HL_9Y4G_060

3D structure

PDB id

9Y4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UUCAGUACG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y4G|1|A6|U|4301
9Y4G|1|A6|U|4302
9Y4G|1|A6|C|4303
9Y4G|1|A6|A|4304
9Y4G|1|A6|G|4305
9Y4G|1|A6|U|4306
9Y4G|1|A6|A|4307
9Y4G|1|A6|C|4308
9Y4G|1|A6|G|4309

Current chains

Chain A6

LSU-beta rRNA (2108-MER)

Nearby chains

Chain A5

Large subunit ribosomal RNA; LSU rRNA

Chain CQ

60S ribosomal protein L18

Chain CT

60S ribosomal protein L21

Chain Ca

60S ribosomal protein L27a

Chain Cb

60S ribosomal protein L29

Chain Co

60S ribosomal protein L36a