HL_9Y4G_074
3D structure
- PDB id
- 9Y4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- AUCUCGUCUGAUCU
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9Y4G_074 not in the Motif Atlas
- Geometric match to HL_9AXU_068
- Geometric discrepancy: 0.2316
- The information below is about HL_9AXU_068
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01182.1
- Basepair signature
- cWW-cWS-F-tSW-F-tSH-tSH-cWW-F-F
- Number of instances in this motif group
- 4
Unit IDs
9Y4G|1|A7|A|32
9Y4G|1|A7|U|33
9Y4G|1|A7|C|34
9Y4G|1|A7|U|35
9Y4G|1|A7|C|36
9Y4G|1|A7|G|37
9Y4G|1|A7|U|38
9Y4G|1|A7|C|39
9Y4G|1|A7|U|40
9Y4G|1|A7|G|41
9Y4G|1|A7|A|42
9Y4G|1|A7|U|43
9Y4G|1|A7|C|44
9Y4G|1|A7|U|45
Current chains
- Chain A7
- 5S ribosomal RNA
Nearby chains
- Chain A6
- Large subunit ribosomal RNA; LSU rRNA
- Chain CD
- 60S ribosomal protein L5
- Chain CJ
- 60S ribosomal protein L11
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