HL_9Y4G_076
3D structure
- PDB id
- 9Y4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GGAGAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9Y4G_076 not in the Motif Atlas
- Homologous match to HL_7A0S_070
- Geometric discrepancy: 0.2254
- The information below is about HL_7A0S_070
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.5
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 428
Unit IDs
9Y4G|1|A7|G|86
9Y4G|1|A7|G|87
9Y4G|1|A7|A|88
9Y4G|1|A7|G|89
9Y4G|1|A7|A|90
9Y4G|1|A7|C|91
Current chains
- Chain A7
- 5S ribosomal RNA
Nearby chains
- Chain A5
- Large subunit ribosomal RNA; LSU rRNA
- Chain A6
- Large subunit ribosomal RNA; LSU rRNA
- Chain CI
- 60S ribosomal protein L10-like
- Chain CS
- 60S ribosomal protein L18a
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