HL_9Y79_023

3D structure

PDB id

9Y79 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation loosely coupled complex (TTC-LC^walked) containing mRNA with a 39 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

9Y79|1|D|C|841, 9Y79|1|D|U|842, 9Y79|1|D|U|843, 9Y79|1|D|A|845

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y79|1|D|C|840
9Y79|1|D|C|841
9Y79|1|D|U|842
9Y79|1|D|U|843
9Y79|1|D|G|844
9Y79|1|D|A|845
9Y79|1|D|G|846

Current chains

Chain D

16S rRNA

Nearby chains

Chain C

Small ribosomal subunit protein bS18

Chain H

Small ribosomal subunit protein bS1