HL_9YPV_093

3D structure

PDB id

9YPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

GTPBP1*GCP*Phe-tRNA*ribosome in the open state, Structure IId

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUCGCCGUGCC

Length

11 nucleotides

Bulged bases

9YPV|1|9|G|385

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9YPV|1|9|G|377
9YPV|1|9|U|378
9YPV|1|9|C|379
9YPV|1|9|G|380
9YPV|1|9|C|381
9YPV|1|9|C|382
9YPV|1|9|G|383
9YPV|1|9|U|384
9YPV|1|9|G|385
9YPV|1|9|C|386
9YPV|1|9|C|387

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain II

40S ribosomal protein S8

Chain LL

Ribosomal protein S11