HL_9YPY_037

3D structure

PDB id

9YPY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome with accommodated A-site tRNA, Structure V

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CAUGGAAGUCG

Length

11 nucleotides

Bulged bases

9YPY|1|5|A|1984

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9YPY|1|5|C|1978
9YPY|1|5|A|1979
9YPY|1|5|U|1980
9YPY|1|5|G|1981
9YPY|1|5|G|1982
9YPY|1|5|A|1983
9YPY|1|5|A|1984
9YPY|1|5|G|1985
9YPY|1|5|U|1986
9YPY|1|5|C|1987
9YPY|1|5|G|1988

Current chains

Chain 5

28S ribosomal RNA

Nearby chains