HL_9YQ1_034

3D structure

PDB id

9YQ1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Vacant ribosome with P-site tRNA, substate 3, Structure Ic

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAUGGAAGUCG

Length

11 nucleotides

Bulged bases

9YQ1|1|5|A|1984

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9YQ1|1|5|C|1978
9YQ1|1|5|A|1979
9YQ1|1|5|U|1980
9YQ1|1|5|G|1981
9YQ1|1|5|G|1982
9YQ1|1|5|A|1983
9YQ1|1|5|A|1984
9YQ1|1|5|G|1985
9YQ1|1|5|U|1986
9YQ1|1|5|C|1987
9YQ1|1|5|G|1988

Current chains

Chain 5

28S ribosomal RNA

Nearby chains