HL_9YQ1_097

3D structure

PDB id

9YQ1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Vacant ribosome with P-site tRNA, substate 3, Structure Ic

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGUUCAAAG

Length

9 nucleotides

Bulged bases

9YQ1|1|9|G|821

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9YQ1|1|9|U|820
9YQ1|1|9|G|821
9YQ1|1|9|U|822
9YQ1|1|9|U|823
9YQ1|1|9|C|824
9YQ1|1|9|A|825
9YQ1|1|9|A|826
9YQ1|1|9|A|827
9YQ1|1|9|G|828

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain EE

eS4 (S4 X isoform)

Chain JJ

Ribosomal protein S9 (Predicted)

Chain YY

40S ribosomal protein S24