HL_9ZTL_001
3D structure
- PDB id
- 9ZTL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Single Particle Cryo EM Analysis of a Ribosome Nascent Globin Complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.91 Å
Loop
- Sequence
- AUAAUGGCUAUU
- Length
- 12 nucleotides
- Bulged bases
- 9ZTL|1|5|G|17, 9ZTL|1|5|G|18, 9ZTL|1|5|C|19, 9ZTL|1|5|A|21
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9ZTL_001 not in the Motif Atlas
- Homologous match to HL_1F7U_001
- Geometric discrepancy: 0.2485
- The information below is about HL_1F7U_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_55043.2
- Basepair signature
- cWW-tSH-cWS-F
- Number of instances in this motif group
- 5
Unit IDs
9ZTL|1|5|A|12
9ZTL|1|5|U|13
9ZTL|1|5|A|14
9ZTL|1|5|A|15
9ZTL|1|5|U|16
9ZTL|1|5|G|17
9ZTL|1|5|G|18
9ZTL|1|5|C|19
9ZTL|1|5|U|20
9ZTL|1|5|A|21
9ZTL|1|5|U|22
9ZTL|1|5|U|23
Current chains
- Chain 5
- P-site tRNA
Nearby chains
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
- Chain f
- 50S ribosomal protein L5
Coloring options: