HL_9ZTL_038

3D structure

PDB id

9ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Single Particle Cryo EM Analysis of a Ribosome Nascent Globin Complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

UGAAUCCAUAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9ZTL_038 not in the Motif Atlas

Homologous match to HL_8B0X_037

Geometric discrepancy: 0.1216

The information below is about HL_8B0X_037

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50765.2

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

9ZTL|1|a|U|158
9ZTL|1|a|G|159
9ZTL|1|a|A|160
9ZTL|1|a|A|161
9ZTL|1|a|U|162
9ZTL|1|a|C|163
9ZTL|1|a|C|164
9ZTL|1|a|A|165
9ZTL|1|a|U|166
9ZTL|1|a|A|167
9ZTL|1|a|G|168

Current chains

Chain a

23s rRNA

Nearby chains

Chain w

50S ribosomal protein L28