HL_9ZTL_042

3D structure

PDB id

9ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Single Particle Cryo EM Analysis of a Ribosome Nascent Globin Complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

CUGGAAAG

Length

8 nucleotides

Bulged bases

9ZTL|1|a|A|311

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9ZTL_042 not in the Motif Atlas

Homologous match to HL_7A0S_010

Geometric discrepancy: 0.1801

The information below is about HL_7A0S_010

Detailed Annotation

T-loop with 1 bulged base

Broad Annotation

T-loop

Motif group

HL_13999.4

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

24

Unit IDs

9ZTL|1|a|C|305
9ZTL|1|a|U|306
9ZTL|1|a|G|307
9ZTL|1|a|G|308
9ZTL|1|a|A|309
9ZTL|1|a|A|310
9ZTL|1|a|A|311
9ZTL|1|a|G|312

Current chains

Chain a

23s rRNA

Nearby chains

Chain t

50S ribosomal protein L24