HL_9ZTL_046

3D structure

PDB id

9ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Single Particle Cryo EM Analysis of a Ribosome Nascent Globin Complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

9ZTL|1|a|G|411

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9ZTL_046 not in the Motif Atlas

Homologous match to HL_7A0S_014

Geometric discrepancy: 0.1107

The information below is about HL_7A0S_014

Detailed Annotation

Pseudoknot geometry

Broad Annotation

No text annotation

Motif group

HL_30680.5

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

16

Unit IDs

9ZTL|1|a|G|410
9ZTL|1|a|G|411
9ZTL|1|a|A|412
9ZTL|1|a|C|413
9ZTL|1|a|C|414
9ZTL|1|a|A|415
9ZTL|1|a|U|416
9ZTL|1|a|C|417

Current chains

Chain a

23s rRNA

Nearby chains

Chain k

50S ribosomal protein L15