IL_10PX_066
3D structure
- PDB id
- 10PX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with benzoxaborole derivative of azithromycin (AZI-BB2), mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.45 Å
Loop
- Sequence
- CGUAAC*GGAGAAG
- Length
- 13 nucleotides
- Bulged bases
- 10PX|1|1A|G|1699
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_10PX_066 not in the Motif Atlas
- Homologous match to IL_7A0S_063
- Geometric discrepancy: 0.1103
- The information below is about IL_7A0S_063
- Detailed Annotation
- tSH-tSH-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_20700.2
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 11
Unit IDs
10PX|1|1A|C|1686
10PX|1|1A|G|1687
10PX|1|1A|U|1688
10PX|1|1A|A|1689
10PX|1|1A|A|1690
10PX|1|1A|C|1691
*
10PX|1|1A|G|1696
10PX|1|1A|G|1697
10PX|1|1A|A|1698
10PX|1|1A|G|1699
10PX|1|1A|A|1700
10PX|1|1A|A|1701
10PX|1|1A|G|1702
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 1D
- 50S ribosomal protein L2
- Chain 1a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: