IL_10QM_035
3D structure
- PDB id
- 10QM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.coli 50S ribosomal subunit bound to compound 48a
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.49 Å
Loop
- Sequence
- UUAAGUG*CUAAA
- Length
- 12 nucleotides
- Bulged bases
- 10QM|1|I|A|1143
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_10QM_035 not in the Motif Atlas
- Homologous match to IL_7A0S_036
- Geometric discrepancy: 0.3013
- The information below is about IL_7A0S_036
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_57188.6
- Basepair signature
- cWW-tWW-L-tWW-cWW-cSH
- Number of instances in this motif group
- 6
Unit IDs
10QM|1|I|U|1018
10QM|1|I|U|1019
10QM|1|I|A|1020
10QM|1|I|A|1021
10QM|1|I|G|1022
10QM|1|I|U|1023
10QM|1|I|G|1024
*
10QM|1|I|C|1140
10QM|1|I|U|1141
10QM|1|I|A|1142
10QM|1|I|A|1143
10QM|1|I|A|1144
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain J
- 5S ribosomal RNA; 5S rRNA
- Chain R
- Large ribosomal subunit protein uL13
- Chain m
- 50S ribosomal protein L36
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