IL_11BQ_076
3D structure
- PDB id
- 11BQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli 70S ribosome containing an evolved 16S rRNA (EC-S3.5)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAAC*GAGUGAAAAAGAAC
- Length
- 18 nucleotides
- Bulged bases
- 11BQ|1|a|A|504, 11BQ|1|a|A|508
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11BQ_076 not in the Motif Atlas
- Geometric match to IL_8B0X_075
- Geometric discrepancy: 0.0503
- The information below is about IL_8B0X_075
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44923.2
- Basepair signature
- cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L
- Number of instances in this motif group
- 10
Unit IDs
11BQ|1|a|G|481
11BQ|1|a|A|482
11BQ|1|a|A|483
11BQ|1|a|C|484
*
11BQ|1|a|G|496
11BQ|1|a|A|497
11BQ|1|a|G|498
11BQ|1|a|U|499
11BQ|1|a|G|500
11BQ|1|a|A|501
11BQ|1|a|A|502
11BQ|1|a|A|503
11BQ|1|a|A|504
11BQ|1|a|A|505
11BQ|1|a|G|506
11BQ|1|a|A|507
11BQ|1|a|A|508
11BQ|1|a|C|509
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain r
- Large ribosomal subunit protein uL22
- Chain t
- 50S ribosomal protein L24
Coloring options: