IL_11BQ_086
3D structure
- PDB id
- 11BQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli 70S ribosome containing an evolved 16S rRNA (EC-S3.5)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GGG*CAAUC
- Length
- 8 nucleotides
- Bulged bases
- 11BQ|1|a|G|776, 11BQ|1|a|A|788, 11BQ|1|a|A|789, 11BQ|1|a|U|790
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11BQ_086 not in the Motif Atlas
- Geometric match to IL_9E6Q_032
- Geometric discrepancy: 0.0364
- The information below is about IL_9E6Q_032
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_89509.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 10
Unit IDs
11BQ|1|a|G|775
11BQ|1|a|G|776
11BQ|1|a|G|777
*
11BQ|1|a|C|787
11BQ|1|a|A|788
11BQ|1|a|A|789
11BQ|1|a|U|790
11BQ|1|a|C|791
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain 1
- Large ribosomal subunit protein bL34
- Chain c
- 50S ribosomal protein L2
- Chain e
- Large ribosomal subunit protein uL4
- Chain r
- Large ribosomal subunit protein uL22
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