IL_11DG_126

3D structure

PDB id

11DG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved Vibrio cholerae 16S rRNA (VC-S4.4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11DG|1|a|U|1851
11DG|1|a|U|1852
11DG|1|a|A|1853
11DG|1|a|A|1854
11DG|1|a|U|1855
11DG|1|a|U|1856
11DG|1|a|G|1857
11DG|1|a|A|1858
11DG|1|a|U|1859
11DG|1|a|G|1860
*
11DG|1|a|U|1882
11DG|1|a|U|1883
11DG|1|a|G|1884
11DG|1|a|A|1885
11DG|1|a|U|1886
11DG|1|a|C|1887
11DG|1|a|G|1888
11DG|1|a|A|1889
11DG|1|a|A|1890
11DG|1|a|G|1891

Current chains

Chain a

23S ribosomal RNA

Nearby chains