IL_8B0X_181

3D structure

PDB id

8B0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translating 70S ribosome in the unrotated state (P and E, tRNAs)

Experimental method

ELECTRON MICROSCOPY

Resolution

1.55 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8B0X_181 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.0479

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

8B0X|1|a|U|1853
8B0X|1|a|U|1854
8B0X|1|a|A|1855
8B0X|1|a|A|1856
8B0X|1|a|U|1857
8B0X|1|a|U|1858
8B0X|1|a|G|1859
8B0X|1|a|A|1860
8B0X|1|a|U|1861
8B0X|1|a|G|1862
*
8B0X|1|a|U|1886
8B0X|1|a|U|1887
8B0X|1|a|G|1888
8B0X|1|a|A|1889
8B0X|1|a|U|1890
8B0X|1|a|C|1891
8B0X|1|a|G|1892
8B0X|1|a|A|1893
8B0X|1|a|A|1894
8B0X|1|a|G|1895

Current chains

Chain a

23S rRNA

Nearby chains