IL_11EL_029
3D structure
- PDB id
- 11EL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Vibrio cholerae (VC-ST)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGAAAGCC*GAAUCG
- Length
- 14 nucleotides
- Bulged bases
- 11EL|1|A|C|632
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11EL_029 not in the Motif Atlas
- Homologous match to IL_6CZR_408
- Geometric discrepancy: 0.5964
- The information below is about IL_6CZR_408
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_78349.2
- Basepair signature
- cWW-tSH-L-R-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
11EL|1|A|U|605
11EL|1|A|G|606
11EL|1|A|A|607
11EL|1|A|A|608
11EL|1|A|A|609
11EL|1|A|G|610
11EL|1|A|C|611
11EL|1|A|C|612
*
11EL|1|A|G|628
11EL|1|A|A|629
11EL|1|A|A|630
11EL|1|A|U|631
11EL|1|A|C|632
11EL|1|A|G|633
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain D
- Small ribosomal subunit protein uS4
- Chain H
- Small ribosomal subunit protein uS8
- Chain P
- Small ribosomal subunit protein bS16
- Chain Q
- Small ribosomal subunit protein uS17
Coloring options: