IL_11FV_024
3D structure
- PDB id
- 11FV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-S3.3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGUAAAG*CG
- Length
- 9 nucleotides
- Bulged bases
- 11FV|1|C|A|566
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11FV_024 not in the Motif Atlas
- Homologous match to IL_6CZR_134
- Geometric discrepancy: 0.1136
- The information below is about IL_6CZR_134
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38186.5
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 5
Unit IDs
11FV|1|C|C|563
11FV|1|C|G|564
11FV|1|C|U|565
11FV|1|C|A|566
11FV|1|C|A|567
11FV|1|C|A|568
11FV|1|C|G|569
*
11FV|1|C|C|874
11FV|1|C|G|875
Current chains
- Chain C
- 16S ribosomal RNA
Nearby chains
- Chain t
- 30S ribosomal protein S12
- Chain y
- Small ribosomal subunit protein uS17
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