IL_11FV_028
3D structure
- PDB id
- 11FV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-S3.3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGAAAUCU*GAACUG
- Length
- 14 nucleotides
- Bulged bases
- 11FV|1|C|U|626
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11FV_028 not in the Motif Atlas
- Homologous match to IL_6CZR_408
- Geometric discrepancy: 0.5153
- The information below is about IL_6CZR_408
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_78349.2
- Basepair signature
- cWW-tSH-L-R-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
11FV|1|C|U|599
11FV|1|C|G|600
11FV|1|C|A|601
11FV|1|C|A|602
11FV|1|C|A|603
11FV|1|C|U|604
11FV|1|C|C|605
11FV|1|C|U|606
*
11FV|1|C|G|622
11FV|1|C|A|623
11FV|1|C|A|624
11FV|1|C|C|625
11FV|1|C|U|626
11FV|1|C|G|627
Current chains
- Chain C
- 16S ribosomal RNA
Nearby chains
- Chain F
- Small ribosomal subunit protein uS4
- Chain o
- Small ribosomal subunit protein uS8
- Chain x
- Small ribosomal subunit protein bS16
- Chain y
- Small ribosomal subunit protein uS17
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