IL_11FV_035
3D structure
- PDB id
- 11FV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-S3.3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CAAAC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11FV_035 not in the Motif Atlas
- Homologous match to IL_6CZR_145
- Geometric discrepancy: 0.1037
- The information below is about IL_6CZR_145
- Detailed Annotation
- tSH-tWH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.6
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
11FV|1|C|C|773
11FV|1|C|A|774
11FV|1|C|A|775
11FV|1|C|A|776
11FV|1|C|C|777
*
11FV|1|C|G|793
11FV|1|C|G|794
11FV|1|C|U|795
11FV|1|C|A|796
11FV|1|C|G|797
Current chains
- Chain C
- 16S ribosomal RNA
Nearby chains
- Chain 3
- Small ribosomal subunit protein bS21
- Chain I
- Large subunit ribosomal RNA; LSU rRNA
- Chain r
- 30S ribosomal protein S11
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