IL_11FV_098
3D structure
- PDB id
- 11FV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-S3.3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UCCCAAAG*CA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11FV_098 not in the Motif Atlas
- Homologous match to IL_7A0S_034
- Geometric discrepancy: 0.1809
- The information below is about IL_7A0S_034
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_46868.1
- Basepair signature
- cWW-L-cWW-L-L-R-L-R
- Number of instances in this motif group
- 5
Unit IDs
11FV|1|I|U|1004
11FV|1|I|C|1005
11FV|1|I|C|1006
11FV|1|I|C|1007
11FV|1|I|A|1008
11FV|1|I|A|1009
11FV|1|I|A|1010
11FV|1|I|G|1011
*
11FV|1|I|C|1150
11FV|1|I|A|1151
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain R
- Large ribosomal subunit protein uL13
- Chain Y
- 50S ribosomal protein L20
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