IL_11GG_018

3D structure

PDB id

11GG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

GGAGGAA*UUGACGUUAC

Length

17 nucleotides

Bulged bases

11GG|1|C|U|479

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11GG|1|C|G|440
11GG|1|C|G|441
11GG|1|C|A|442
11GG|1|C|G|443
11GG|1|C|G|444
11GG|1|C|A|445
11GG|1|C|A|446
*
11GG|1|C|U|473
11GG|1|C|U|474
11GG|1|C|G|475
11GG|1|C|A|476
11GG|1|C|C|477
11GG|1|C|G|478
11GG|1|C|U|479
11GG|1|C|U|480
11GG|1|C|A|481
11GG|1|C|C|482

Current chains

Chain C

16S ribosomal RNA

Nearby chains

Chain F

Small ribosomal subunit protein uS4

Chain x

Small ribosomal subunit protein bS16