IL_11GG_046

3D structure

PDB id

11GG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

UAGUUAC*GCACUCUAA

Length

16 nucleotides

Bulged bases

11GG|1|C|U|1120

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11GG|1|C|U|1116
11GG|1|C|A|1117
11GG|1|C|G|1118
11GG|1|C|U|1119
11GG|1|C|U|1120
11GG|1|C|A|1121
11GG|1|C|C|1122
*
11GG|1|C|G|1138
11GG|1|C|C|1139
11GG|1|C|A|1140
11GG|1|C|C|1141
11GG|1|C|U|1142
11GG|1|C|C|1143
11GG|1|C|U|1144
11GG|1|C|A|1145
11GG|1|C|A|1146

Current chains

Chain C

16S ribosomal RNA

Nearby chains

Chain p

Small ribosomal subunit protein uS9

Chain q

Small ribosomal subunit protein uS10