IL_11GG_062

3D structure

PDB id

11GG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

GGUU*ACC

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_11GG_062 not in the Motif Atlas

Geometric match to IL_4V9F_053

Geometric discrepancy: 0.3541

The information below is about IL_4V9F_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_49140.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

4

Unit IDs

11GG|1|I|G|1
11GG|1|I|G|2
11GG|1|I|U|3
11GG|1|I|U|4
*
11GG|1|I|A|2900
11GG|1|I|C|2901
11GG|1|I|C|2902

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain R

Large ribosomal subunit protein uL13