IL_11GG_101

3D structure

PDB id

11GG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

GAAGG*CGGC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11GG|1|I|G|1038
11GG|1|I|A|1039
11GG|1|I|A|1040
11GG|1|I|G|1041
11GG|1|I|G|1042
*
11GG|1|I|C|1114
11GG|1|I|G|1115
11GG|1|I|G|1116
11GG|1|I|C|1117

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain U

Large ribosomal subunit protein uL16

Chain d

Large ribosomal subunit protein bL25