IL_11GG_114

3D structure

PDB id

11GG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

CGAAG*CUAAG

Length

10 nucleotides

Bulged bases

11GG|1|I|A|1420

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_11GG_114 not in the Motif Atlas

Homologous match to IL_7A0S_051

Geometric discrepancy: 0.5763

The information below is about IL_7A0S_051

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_08938.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

25

Unit IDs

11GG|1|I|C|1417
11GG|1|I|G|1418
11GG|1|I|A|1419
11GG|1|I|A|1420
11GG|1|I|G|1421
*
11GG|1|I|C|1577
11GG|1|I|U|1578
11GG|1|I|A|1579
11GG|1|I|A|1580
11GG|1|I|G|1581

Current chains

Chain I

23S ribosomal RNA

Nearby chains