IL_11GG_122

3D structure

PDB id

11GG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

CGAG*UGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_11GG_122 not in the Motif Atlas

Geometric match to IL_9E6Q_021

Geometric discrepancy: 0.1281

The information below is about IL_9E6Q_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_45790.2

Basepair signature

cWW-tSH-L-tHS-cWW

Number of instances in this motif group

12

Unit IDs

11GG|1|I|C|1526
11GG|1|I|G|1527
11GG|1|I|A|1528
11GG|1|I|G|1529
*
11GG|1|I|U|1542
11GG|1|I|G|1543
11GG|1|I|A|1544
11GG|1|I|A|1545
11GG|1|I|G|1546

Current chains

Chain I

23S ribosomal RNA

Nearby chains