IL_11GG_126
3D structure
- PDB id
- 11GG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-ST)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.02 Å
Loop
- Sequence
- GGAACUAGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- 11GG|1|I|G|1992
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11GG_126 not in the Motif Atlas
- Geometric match to IL_4WF9_117
- Geometric discrepancy: 0.0739
- The information below is about IL_4WF9_117
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80252.2
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 11
Unit IDs
11GG|1|I|G|1666
11GG|1|I|G|1667
11GG|1|I|A|1668
11GG|1|I|A|1669
11GG|1|I|C|1670
11GG|1|I|U|1671
11GG|1|I|A|1672
11GG|1|I|G|1673
11GG|1|I|G|1674
*
11GG|1|I|C|1990
11GG|1|I|U|1991
11GG|1|I|G|1992
11GG|1|I|U|1993
11GG|1|I|C|1994
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain L
- Large ribosomal subunit protein uL3
- Chain S
- Large ribosomal subunit protein uL14
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