IL_11GG_149

3D structure

PDB id

11GG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

GGAGGCUUUGAAG*UGGAGCCGACCUUGAAAUAC

Length

33 nucleotides

Bulged bases

11GG|1|I|G|2125, 11GG|1|I|U|2131, 11GG|1|I|U|2132, 11GG|1|I|C|2165, 11GG|1|I|G|2168, 11GG|1|I|A|2169, 11GG|1|I|U|2172

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11GG|1|I|G|2124
11GG|1|I|G|2125
11GG|1|I|A|2126
11GG|1|I|G|2127
11GG|1|I|G|2128
11GG|1|I|C|2129
11GG|1|I|U|2130
11GG|1|I|U|2131
11GG|1|I|U|2132
11GG|1|I|G|2133
11GG|1|I|A|2134
11GG|1|I|A|2135
11GG|1|I|G|2136
*
11GG|1|I|U|2155
11GG|1|I|G|2156
11GG|1|I|G|2157
11GG|1|I|A|2158
11GG|1|I|G|2159
11GG|1|I|C|2160
11GG|1|I|C|2161
11GG|1|I|G|2162
11GG|1|I|A|2163
11GG|1|I|C|2164
11GG|1|I|C|2165
11GG|1|I|U|2166
11GG|1|I|U|2167
11GG|1|I|G|2168
11GG|1|I|A|2169
11GG|1|I|A|2170
11GG|1|I|A|2171
11GG|1|I|U|2172
11GG|1|I|A|2173
11GG|1|I|C|2174

Current chains

Chain I

23S ribosomal RNA

Nearby chains