IL_11GG_152

3D structure

PDB id

11GG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

CACGAAGGUUGGCUAAU*AGGUUAGUG

Length

26 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11GG|1|I|C|2283
11GG|1|I|A|2284
11GG|1|I|C|2285
11GG|1|I|G|2286
11GG|1|I|A|2287
11GG|1|I|A|2288
11GG|1|I|G|2289
11GG|1|I|G|2290
11GG|1|I|U|2291
11GG|1|I|U|2292
11GG|1|I|G|2293
11GG|1|I|G|2294
11GG|1|I|C|2295
11GG|1|I|U|2296
11GG|1|I|A|2297
11GG|1|I|A|2298
11GG|1|I|U|2299
*
11GG|1|I|A|2317
11GG|1|I|G|2318
11GG|1|I|G|2319
11GG|1|I|U|2320
11GG|1|I|U|2321
11GG|1|I|A|2322
11GG|1|I|G|2323
11GG|1|I|U|2324
11GG|1|I|G|2325

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain J

5S ribosomal RNA; 5S rRNA

Chain N

Large ribosomal subunit protein uL5

Chain W

Large ribosomal subunit protein uL18

Chain j

50S ribosomal protein L33

Chain l

50S ribosomal protein L35