IL_11GG_164

3D structure

PDB id

11GG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

UGGGGC*GUCCCAAG

Length

14 nucleotides

Bulged bases

11GG|1|I|A|2542

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11GG|1|I|U|2522
11GG|1|I|G|2523
11GG|1|I|G|2524
11GG|1|I|G|2525
11GG|1|I|G|2526
11GG|1|I|C|2527
*
11GG|1|I|G|2536
11GG|1|I|U|2537
11GG|1|I|C|2538
11GG|1|I|C|2539
11GG|1|I|C|2540
11GG|1|I|A|2541
11GG|1|I|A|2542
11GG|1|I|G|2543

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain O

Large ribosomal subunit protein uL6

Chain R

Large ribosomal subunit protein uL13

Chain m

50S ribosomal protein L36