IL_11GG_181

3D structure

PDB id

11GG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

GACCCC*GAACUC

Length

12 nucleotides

Bulged bases

11GG|1|J|C|35, 11GG|1|J|C|36

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11GG|1|J|G|33
11GG|1|J|A|34
11GG|1|J|C|35
11GG|1|J|C|36
11GG|1|J|C|37
11GG|1|J|C|38
*
11GG|1|J|G|44
11GG|1|J|A|45
11GG|1|J|A|46
11GG|1|J|C|47
11GG|1|J|U|48
11GG|1|J|C|49

Current chains

Chain J

5S ribosomal RNA

Nearby chains

Chain I

Large subunit ribosomal RNA; LSU rRNA

Chain N

Large ribosomal subunit protein uL5

Chain Q

50S ribosomal protein L31

Chain W

Large ribosomal subunit protein uL18