IL_11HG_029
3D structure
- PDB id
- 11HG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,CCDC124,and LARP1,40S-head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUUAAAA*UC
- Length
- 9 nucleotides
- Bulged bases
- 11HG|1|18|A|668
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11HG_029 not in the Motif Atlas
- Homologous match to IL_9PN5_174
- Geometric discrepancy: 0.1119
- The information below is about IL_9PN5_174
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_20847.4
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 7
Unit IDs
11HG|1|18|G|665
11HG|1|18|U|666
11HG|1|18|U|667
11HG|1|18|A|668
11HG|1|18|A|669
11HG|1|18|A|670
11HG|1|18|A|671
*
11HG|1|18|U|1161
11HG|1|18|C|1162
Current chains
- Chain 18
- 18S rRNA
Nearby chains
- Chain RR
- uS12
- Chain S2
- 40S ribosomal protein S2
- Chain UU
- eS26
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