IL_11HG_145
3D structure
- PDB id
- 11HG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,CCDC124,and LARP1,40S-head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUG*CUAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11HG_145 not in the Motif Atlas
- Homologous match to IL_8GLP_064
- Geometric discrepancy: 0.0452
- The information below is about IL_8GLP_064
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_16315.2
- Basepair signature
- cWW-cWW-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
11HG|1|28|C|1686
11HG|1|28|U|1687
11HG|1|28|G|1688
*
11HG|1|28|C|1848
11HG|1|28|U|1849
11HG|1|28|A|1850
11HG|1|28|G|1851
Current chains
- Chain 28
- 28s rRNA
Nearby chains
- Chain 13
- 60S ribosomal protein L13
- Chain 21
- 60S ribosomal protein L21
- Chain 29
- Large ribosomal subunit protein eL29
- Chain Q
- Large ribosomal subunit protein eL18
- Chain dd
- 60S ribosomal protein L27a
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