IL_11HG_147
3D structure
- PDB id
- 11HG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,CCDC124,and LARP1,40S-head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGGUAA*UAAAUG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11HG_147 not in the Motif Atlas
- Homologous match to IL_8GLP_291
- Geometric discrepancy: 0.1929
- The information below is about IL_8GLP_291
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_46203.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
11HG|1|28|C|1732
11HG|1|28|G|1733
11HG|1|28|G|1734
11HG|1|28|U|1735
11HG|1|28|A|1736
11HG|1|28|A|1737
*
11HG|1|28|U|1792
11HG|1|28|A|1793
11HG|1|28|A|1794
11HG|1|28|A|1795
11HG|1|28|U|1796
11HG|1|28|G|1797
Current chains
- Chain 28
- 28s rRNA
Nearby chains
- Chain 10
- Ribosomal protein L10
- Chain 20
- Large ribosomal subunit protein eL20
- Chain 21
- 60S ribosomal protein L21
- Chain 6
- 5S ribosomal RNA; 5S rRNA
- Chain L7
- 60S ribosomal protein L7
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