Motif IL_46203.1 Version IL_46203.1 of this group appears in releases 4.1 to 4.1
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 12 | 1-12 | 2-11 | 3-10 | 4-8 | 5-8 | 5-9 | 6-7 | 9-10 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8EPK_004 | 8EPK | 0.0000 | 3 | F | RNA (31-MER) | A2M | 5 | CFZ | 6 | UFT | 7 | A2M | 8 | A2M | 10 | OMG | 13 | * | CFZ | 21 | OMU | 22 | G | 23 | OMC | 24 | CFZ | 25 | UFT | 26 | cWW | ncWB | ntSW | tHW | ntHS | cWW | ||
| 2 | IL_8GLP_291 | 8GLP | 0.8318 | 0 | L5 | LSU rRNA | PSU | 1792 | A | 1793 | A | 1794 | A | 1795 | U | 1796 | G | 1797 | * | C | 1732 | G | 1733 | G | 1734 | U | 1735 | A | 1736 | A | 1737 | cWW | tSH | tHW | cBW | cWW | cSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| (A2M)(CFZ)(UFT)(A2M)(UFT)(A2M)(CFZ)(CFZ)(OMG)*(CFZ)(OMU)G(OMC)(CFZ)(UFT) | 1 |
| (PSU)AAAUG*CGGUAA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| (CFZ)(UFT)(A2M)(UFT)(A2M)(CFZ)(CFZ)*(OMU)G(OMC)(CFZ) | 1 |
| AAAU*GGUA | 1 |
Release history
| Release | 4.1 |
|---|---|
| Date | 2025-09-10 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Heat map statistics
- Min 0.83 | Avg 0.42 | Max 0.83
Coloring options: