IL_11HG_165
3D structure
- PDB id
- 11HG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,CCDC124,and LARP1,40S-head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUGGC*GAAUC
- Length
- 10 nucleotides
- Bulged bases
- 11HG|1|28|G|1975
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11HG_165 not in the Motif Atlas
- Homologous match to IL_9AXU_052
- Geometric discrepancy: 0.4597
- The information below is about IL_9AXU_052
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
11HG|1|28|G|1973
11HG|1|28|U|1974
11HG|1|28|G|1975
11HG|1|28|G|1976
11HG|1|28|C|1977
*
11HG|1|28|G|1989
11HG|1|28|A|1990
11HG|1|28|A|1991
11HG|1|28|U|1992
11HG|1|28|C|1993
Current chains
- Chain 28
- 28s rRNA
Nearby chains
- Chain 10
- Ribosomal protein L10
- Chain CE
- Coiled-coil domain-containing protein 124
- Chain s
- 60S acidic ribosomal protein P0
- Chain t
- uL11
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