IL_11HG_197
3D structure
- PDB id
- 11HG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,CCDC124,and LARP1,40S-head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UCAAAGU*AAUGAAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11HG_197 not in the Motif Atlas
- Homologous match to IL_9H3G_097
- Geometric discrepancy: 0.1422
- The information below is about IL_9H3G_097
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65359.3
- Basepair signature
- cWW-tSH-L-R-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
11HG|1|28|U|3715
11HG|1|28|C|3716
11HG|1|28|A|3717
11HG|1|28|A|3718
11HG|1|28|A|3719
11HG|1|28|G|3720
11HG|1|28|U|3721
*
11HG|1|28|A|3732
11HG|1|28|A|3733
11HG|1|28|U|3734
11HG|1|28|G|3735
11HG|1|28|A|3736
11HG|1|28|A|3737
11HG|1|28|G|3738
Current chains
- Chain 28
- 28s rRNA
Nearby chains
- Chain 36
- 60S ribosomal protein L36
- Chain 42
- eL42
- Chain L8
- 60S ribosomal protein L8
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