IL_9H3G_097

3D structure

PDB id

9H3G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

1.82 Å

Loop

Sequence

(PSU)CA(A2M)AGU*AACCAAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3G|1|A|PSU|2209
9H3G|1|A|C|2210
9H3G|1|A|A|2211
9H3G|1|A|A2M|2212
9H3G|1|A|A|2213
9H3G|1|A|G|2214
9H3G|1|A|U|2215
*
9H3G|1|A|A|2226
9H3G|1|A|A|2227
9H3G|1|A|C|2228
9H3G|1|A|C|2229
9H3G|1|A|A|2230
9H3G|1|A|A|2231
9H3G|1|A|G|2232

Current chains

Chain A

Ribosomal RNA 25S

Nearby chains

Chain AX

Large ribosomal subunit protein eL36y

Chain BD

Large ribosomal subunit protein eL42z/eL42y

Chain BQ

Large ribosomal subunit protein uL2z

Chain W2

Transfer RNA; tRNA